You can build your own decorator that encapsulates the common options:
def common_options(function):
function = click.option('--unique-flag-1', is_flag=True)(function)
function = click.option('--bar', is_flag=True)(function)
function = click.option('--foo', is_flag=True)(function)
return function
@click.command()
@common_options
def command():
pass