How to revert a “git rm -r .”?

by 
git reset HEAD

Should do it. If you don’t have any uncommitted changes that you care about, then

git reset --hard HEAD

should forcibly reset everything to your last commit. If you do have uncommitted changes, but the first command doesn’t work, then save your uncommitted changes with git stash:

git stash
git reset --hard HEAD
git stash pop

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