r-markdown

Basic Script So now that the R markdown package has been released, here is some code to replicate the features of Knit to Html. require(knitr) # required for knitting from rmd to md require(markdown) # required for md to html knit(‘test.rmd’, ‘test.md’) # creates md file markdownToHTML(‘test.md’, ‘test.html’) # creates html file browseURL(paste(‘file://’, file.path(getwd(),’test.html’), sep=”)) … Read more

I also ran into this today, and fixed it by using cache.lazy = FALSE in the setup chunk in my .Rmd. So what is inside of the first chunk in my R Markdown file looks like this: library(knitr) knitr::opts_chunk$set(cache = TRUE, warning = FALSE, message = FALSE, cache.lazy = FALSE)