How to find count of Null and Nan values for each column in a PySpark dataframe efficiently?

You can use method shown here and replace isNull with isnan: from pyspark.sql.functions import isnan, when, count, col df.select([count(when(isnan(c), c)).alias(c) for c in df.columns]).show() +——-+———-+—+ |session|timestamp1|id2| +——-+———-+—+ | 0| 0| 3| +——-+———-+—+ or df.select([count(when(isnan(c) | col(c).isNull(), c)).alias(c) for c in df.columns]).show() +——-+———-+—+ |session|timestamp1|id2| +——-+———-+—+ | 0| 0| 5| +——-+———-+—+

Overwrite specific partitions in spark dataframe write method

Finally! This is now a feature in Spark 2.3.0: SPARK-20236 To use it, you need to set the spark.sql.sources.partitionOverwriteMode setting to dynamic, the dataset needs to be partitioned, and the write mode overwrite. Example: spark.conf.set(“spark.sql.sources.partitionOverwriteMode”,”dynamic”) data.write.mode(“overwrite”).insertInto(“partitioned_table”) I recommend doing a repartition based on your partition column before writing, so you won’t end up with 400 … Read more

Split Spark dataframe string column into multiple columns

pyspark.sql.functions.split() is the right approach here – you simply need to flatten the nested ArrayType column into multiple top-level columns. In this case, where each array only contains 2 items, it’s very easy. You simply use Column.getItem() to retrieve each part of the array as a column itself: split_col = pyspark.sql.functions.split(df[‘my_str_col’], ‘-‘) df = df.withColumn(‘NAME1’, … Read more

pyspark dataframe filter or include based on list

what it says is “df.score in l” can not be evaluated because df.score gives you a column and “in” is not defined on that column type use “isin” The code should be like this: # define a dataframe rdd = sc.parallelize([(0,1), (0,1), (0,2), (1,2), (1,10), (1,20), (3,18), (3,18), (3,18)]) df = sqlContext.createDataFrame(rdd, [“id”, “score”]) # … Read more

Extract column values of Dataframe as List in Apache Spark

This should return the collection containing single list: dataFrame.select(“YOUR_COLUMN_NAME”).rdd.map(r => r(0)).collect() Without the mapping, you just get a Row object, which contains every column from the database. Keep in mind that this will probably get you a list of Any type. Ïf you want to specify the result type, you can use .asInstanceOf[YOUR_TYPE] in r … Read more

How to create an empty DataFrame with a specified schema?

Lets assume you want a data frame with the following schema: root |– k: string (nullable = true) |– v: integer (nullable = false) You simply define schema for a data frame and use empty RDD[Row]: import org.apache.spark.sql.types.{ StructType, StructField, StringType, IntegerType} import org.apache.spark.sql.Row val schema = StructType( StructField(“k”, StringType, true) :: StructField(“v”, IntegerType, false) … Read more

Concatenate two PySpark dataframes

Maybe you can try creating the unexisting columns and calling union (unionAll for Spark 1.6 or lower): from pyspark.sql.functions import lit cols = [‘id’, ‘uniform’, ‘normal’, ‘normal_2’] df_1_new = df_1.withColumn(“normal_2”, lit(None)).select(cols) df_2_new = df_2.withColumn(“normal”, lit(None)).select(cols) result = df_1_new.union(df_2_new) # To remove the duplicates: result = result.dropDuplicates()

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