You currently can’t configure the metrics_path per target within a job but you can create separate jobs for each of your targets so you can define metrics_path per target.
Your config file would look something like this:
scrape_configs:
- job_name: 'example-target-1'
scrape_interval: 5s
metrics_path: /target-1-path-to-metrics
static_configs:
- targets: ['localhost:8090']
labels:
group: 'dummy'
- job_name: 'example-target-2'
scrape_interval: 5s
metrics_path: /totally-different-path-for-target-2
static_configs:
- targets: ['localhost:8080']
labels:
group: 'dummy-2'