how to specify error log file and output file in qsub

Typically error and output files are given as pbs directives in the qsub script or as command line options to the qsub script like so: #! /bin/bash #PBS -q queue_name #PBS -A account_name #PBS -l nodes=12:ppn=12 #PBS -l walltime=18:00:00 #PBS -e /mypath/error.txt #PBS -o /mypath/output.txt or as a command line option to qsub like so: … Read more

qstat and long job names

This on is a bit messy, but it works as a simple solution to have in the command history. All standard tools. Output is pretty much the same as what you get from a normal qstat call, but you won’t get the headers: One-liner: qstat -xml | tr ‘\n’ ‘ ‘ | sed ‘s#<job_list[^>]*>#\n#g’ \ … Read more

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